Package: reconf 0.2.0
reconf: Confidence Intervals for Random Effect Parameters in Linear Mixed Models
Computes score-based confidence intervals and hypothesis tests for variance and covariance parameters of random effects in linear mixed models fitted with 'lme4'. The intervals invert a profile score statistic on the variance-covariance scale, with nuisance parameters estimated on an extended parameter set. The intervals have near-nominal coverage uniformly in the parameter, including near the boundary of the parameter space, where Wald and likelihood ratio intervals can be unreliable. The methods are described in Shedden and Ekvall (2026) <doi:10.48550/arXiv.2610.04181>, building on Ekvall and Bottai (2026) <doi:10.1093/biomet/asaf079>, Zhang, Ekvall, and Molstad (2025) <doi:10.1093/biomet/asaf010>, and Ekvall and Bottai (2022) <doi:10.1214/22-AOS2177>.
Authors:
reconf_0.2.0.tar.gz
reconf_0.2.0.zip(r-4.7-x86_64)reconf_0.2.0.zip(r-4.7-arm64)reconf_0.2.0.zip(r-4.6-x86_64)reconf_0.2.0.zip(r-4.6-arm64)reconf_0.2.0.zip(r-4.5-x86_64)
reconf_0.2.0.tgz(r-4.6-x86_64)reconf_0.2.0.tgz(r-4.6-arm64)reconf_0.2.0.tgz(r-4.5-x86_64)reconf_0.2.0.tgz(r-4.5-arm64)
reconf_0.2.0.tar.gz(r-4.7-arm64)reconf_0.2.0.tar.gz(r-4.7-x86_64)reconf_0.2.0.tar.gz(r-4.6-arm64)reconf_0.2.0.tar.gz(r-4.6-x86_64)
reconf_0.2.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
reconf/json (API)
| # Install 'reconf' in R: |
| install.packages('reconf', repos = c('https://koekvall.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/koekvall/reconf/issues
- fev1 - FEV1 data from the Six Cities Study
confidence-intervalshypothesis-testingmixed-modelsstatisticscpp
Last updated from:df581d7e05. Checks:15 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | OK | 175 | ||
| linux-devel-x86_64 | OK | 148 | ||
| source / vignettes | OK | 415 | ||
| linux-release-arm64 | OK | 265 | ||
| linux-release-x86_64 | OK | 311 | ||
| macos-release-arm64 | OK | 224 | ||
| macos-release-x86_64 | OK | 373 | ||
| macos-oldrel-arm64 | OK | 140 | ||
| macos-oldrel-x86_64 | OK | 491 | ||
| windows-devel-arm64 | OK | 238 | ||
| windows-devel-x86_64 | OK | 244 | ||
| windows-release-arm64 | OK | 254 | ||
| windows-release-x86_64 | OK | 423 | ||
| windows-oldrel-x86_64 | OK | 197 | ||
| wasm-release | OK | 313 |
Exports:tidyvc_civc_loglikvc_modelvc_test
Dependencies:bootgenericslatticelme4MASSMatrixminqanlmenloptrrbibutilsRcppRcppEigenRdpackreformulastrust
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| FEV1 data from the Six Cities Study | fev1 |
| Print method for confidence intervals | print.vc_ci |
| Tidy confidence intervals | tidy.vc_ci |
| Confidence intervals for covariance parameters | vc_ci |
| Log-likelihood as a function of the covariance parameters | vc_loglik |
| Model for inference on covariance parameters | print.vc_model vc_model vc_model.lmerMod |
| Score test for covariance parameters | vc_test |
